Here are the papers published in 2024
- B. M. Garduñ, Patrick Hanni, Chelsea Hays, Patricia Cogram, Nathan Insel, Xiangmin Xu (2024) How the Forebrain Transitions to Adulthood: Developmental Plasticity Markers in a Long-lived Rodent Reveal Region Diversity and the Uniqueness of Adolescence. Front. Neurosci. Sec. Neurodevelopment Volume 18 – 2024 | doi: 10.3389/fnins.2024.1365737
- Alexis Bouin1#, Ginny Wu#, Orkide O. Koyuncu, Qiao Ye, Keun-Young Kim, Michele Wu, Liqi Tong, Lujia Chen, Sebastien Phan, Mason R. Mackey, Ranjan Ramachandra, Mark H. Ellisman, Todd C. Holmes, Bert L. Semler, Xiangmin Xu (2024) New rabies viral resources for multi-scale neural circuit mapping. Molecular Psychiatry Mol Psychiatry (2024). https://doi.org/10.1038/s41380-024-02451-6
- Omar Vazquez, Xiangmin Xu, Zhaoxia Yu. Introduction to Linear, Generalized Linear, and Mixed-Effects Models Chapter 5 in the book,”Statistical Methods in Epilepsy (Chapman & Hall/CRC Interdisciplinary Statistics)”, 1st Edition by Sharon Chiang (Editor), Vikram Rao (Editor), Marina Vannucci (Editor). CRC Press, Taylor & Francis Group (2024)
- Yanjun Sun, Douglas A Nitz, Xiangmin Xu, Lisa M Giocomo (2024) Subicular neurons encode concave and convex geometries. Nature, Published 06 March 2024 https://doi.org/10.1038/s41586-024-07139-z
- Usha Nekanti, Pooja Sakthivel, Atena Zahedi, Dana Creasman, Rebecca Nishi, Courtney Dumont, Katja Piltti, Glenn Guardamondo, Norbert Hernandez, Xingyuan Chen, Hui Song, Xiaoxiao Lin, Joshua Martinez, Lillian On, Anita Lakatos, Kiran Pawar, Brian David, Zhiling Guo, Stephanie Seidlits, Xiangmin Xu, Lonnie Shea, Brian Cummings, Aileen Anderson (2024) Multichannel bridges and NSC synergize to enhance axon regeneration, myelination, synaptic reconnection, and recovery after SCI. npj Regenerative Medicine 9, 12 (2024). https://doi.org/10.1038/s41536-024-00356-0
- Patricia Cograma, B. Maximiliano Garduño, Bing Ren, Xiangmin Xu (2024) Meeting report for the first International Conference on Unconventional Animal Models of Alzheimer´s Disease and Aging. Journal of Alzheimer’s Disease 2024 Feb 20. doi: 10.3233/JAD-249004. Online ahead of print. PMID: 38393919 DOI: 10.3233/JAD-249004
- Qiao Ye, Gocylen Gast, Erik George Wilfley, Hanh Huynh, Chelsea Hays, Todd C. Holmes, Xiangmin Xu*. (2024) Monosynaptic rabies tracing reveals sex- and age-dependent dorsal subiculum connectivity alterations in an Alzheimer’s disease mouse model. Journal of Neuroscience 17 April 2024, 44 (16) e1796232024; DOI: https://doi.org/10.1523/JNEUROSCI.1796-23.2024
- Pan Gao, Matthew Xavier Rivera, Xiaoxiao Lin, Todd C Holme, Hu Zhao, Xiangmin Xu* (2024) Immunolabeling-compatible PEGASOS Tissue Clearing for High-resolution Whole Mouse Brain Imaging. Frontiers in Neural Circuits, 17 April 2024 Volume 18 – 2024 | https://doi.org/10.3389/fncir.2024.1345692
- Xinhe Zheng, Boli Wu, Yuejia Liu, Sean K. Simmons, Kwanho Kim, Grace S. Clarke, Abdullah Ashiq, Joshua Park, Jiwen Li, Zhilin Wang, Liqi Tong, Qizhao Wang, Keerthi T. Rajamani, Rodrigo Mun oz-Castaneda, Shang Mu, Tianbo Qi, Yunxiao Zhang, Zi Chao Ngiam, Naoto Ohte, Carina Hanashima, Zhuhao Wu, Xiangmin Xu, Joshua Z. Levin, and Xin Jin (2024) Massively parallel in vivo Perturb-seq reveals cell-type-specific transcriptional networks in cortical development. Cell 187, 1–13. June 20, 2024. https://doi.org/10.1016/j.cell.2024.04.050
- Lujia Chen, Xiangduo Kong, Kevin Gregory Johnston, Ali Mortazavi, Todd C Holmes, Zhiqun Tan, Kyoko Yokomori, Xiangmin Xu (2024) Single-Cell Spatial Transcriptomics Reveals a Dystrophic Trajectory Following a Developmental Bifurcation of FSHD Myoblast Cell Fates. Genome Research 2024 May 22:gr.278717.123. doi: 10.1101/gr.278717.123. Online ahead of print.2024.
- Kevin G. Johnston, Bereket T. Berackey, Kristine Minh Tran, Alon Gelber, Zhaoxia Yu, Grant MacGregor, Eran A. Mukamel, Zhiqun Tan, Kim Green, Xiangmin Xu. (2024) Single cell spatial transcriptomics reveals distinct patterns of dysregulation in non-neuronal and neuronal cells induced by the Trem2R47H Alzheimer’s risk gene mutation. Molecular Psychiatry https://doi.org/10.1038/s41380-024-02651-0. Published 05 August 2024
- Yunyan Ding, Yicong Huang, Pan Gao, Andy Thai, Atchuth Naveen Chilaparasetti, M Gopi, Xiangmin Xu and Chen Li (2024) Brain Image Data Processing Using Collaborative Data Workflows on Texera. Frontiers in Neural Circuits, 09 July 2024 Volume 18 – 2024 | https://doi.org/10.3389/fncir.2024.1398884.
- Michelle Paff, Steven F. Grieco, Ya Cui, Ole A. Andreassen, Albert LaSpada, Wei Li, Xiangmin Xu (2024) A Role for Alternative Polyadenylation in Risk of Psychiatric Disorders. Genomic Psychiatry (2024) 1, 1–8; doi: https://doi.org/10.61373/gp024i.0049; Published online: 18 July 2024.
- Jingyi Wang, Qiao Ye, Lidek Chou, Saijun Qiu, Xiangmin Xu, Zhongping Chen (2024) Miniaturized Head-mount Doppler Optical Coherence Tomography Scope for Freely Moving Mouse. ACS Photonics 2024, 11, 8, 3381–3389. https://doi.org/10.1021/acsphotonics.4c00856 Published August 6, 2024.
- Jordan Elum, Eric Szelenyi, Barbara Juarez, Grigory Loginov, Alexandria Murry, Catalina Zamorano, Pan Gao, Ginny Wu, Scott Ng-Evans, Joshua Yee, Xiangmin Xu, Sam Golden, Larry Zweifel (2024). Distinct dynamics and intrinsic properties in ventral tegmental area populations mediate reward association and motivation. Cell Rep. 2024 Aug 27;43(9):114668. doi: 10.1016/j.celrep.2024.114668. Epub ahead of print. PMID: 39207900.
- Kevin G. Johnston, Steven F. Grieco, Qing Nie, Fabian J. Theis, Xiangmin Xu (2024) Small Data Methods in Omics: The Power of One. Nature Methods 21, 1597–1602 (2024). https://doi.org/10.1038/s41592-024-02390-8
- Steven F Grieco, Todd C Holmes, Xiangmin Xu (2024) Meeting report for the 2024 UC Irvine Center for neural circuit mapping conference: Brain cell types, circuits, and disorders. Mol Psychiatry. 2024 Oct 9. doi: 10.1038/s41380-024-02775-3. Epub ahead of print. PMID: 39384964.
- Steven F. Grieco #, Kevin G. Johnston,#, Xiangmin Xu (2024) Internet searches for ADHD medications surged during the COVID-19 pandemic. Brain Medicine https://doi.org/10.61373/bm024l.0067
- Luiz M. Oliveira, Aguan Wei, Alyssa Huff, Ginny Wu, Xiangmin Xu, Jan-Marino Ramirez (2023) Afferent and Efferent Connections of the Postinspiratory Complex (PiCo) Revealed by AAV and Monosynaptic Rabies Viral Tracing. J Comp Neurol. 2024 Nov;532(11):e25683. doi: 10.1002/cne.25683.
- Sanad M El-Khatib, Arya R Vagadia, Anh C D Le, Ding Quan Ng, Janet E Baulch, Mingyu Du, Kevin Johnston, Zhiqun Tan, Xiangmin Xu, Alexandre Chan, Munjal M Acharya. (2024) BDNF augmentation reverses cranial radiation therapy-induced cognitive decline and neurodegenerative consequences. Acta Neuropathol Commun. (in press). bioRxiv [Preprint]. 2024 Sep 24:2024.09.23.614590. doi: 10.1101/2024.09.23.614590. PMID: 39386496; PMCID: PMC11463616.
- Xiaoxiao Lin, Ali Ghafuri, Xiaojun Chen, Musab Kazmi, Douglas A. Nitz, Xiangmin Xu (2024). Projection-specific circuits of retrosplenial cortex with differential contributions to spatial cognition. Mol Psychiatry. 2024 Nov 7. doi: 10.1038/s41380-024-02819-8. Epub ahead of print.
- Atchuth Naveen Chilaparasetti, Andy Thai, Pan Gao, Xiangmin Xu, M. Gopi, (2024) Novel approaches for enhancing brain image registration using geometric priors and Laplacian interpolation. NeuroImage (accepted).